Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931667.1_cds_XP_016478410.1_70053
CDS Infomation

[gene=LOC107799775] [db_xref=GeneID:107799775] [protein=probable protein phosphatase 2C 52] [protein_id=XP_016478410.1] [location=complement(join(17739..18209,22173..22396,22477..22594,22692..23012,23091..23351))] [gbkey=CDS]
Sequence

ATGGGAGGTTGTGTCTCGAGTAGCAGCTCGAGTACTTGTAGTAGTAGGAGCAATGGAGAA
AAAGTTTCACATGAATGTTTGGGAATAAGCATGTTCGGTCGAAAGAGGATTAGAAGAAGT
CTTTCTGATCCTGCTGCTGCATTGCAGCATCTGAGTTCGATTCCAAATCGGATCTTTACG
AATGGCAAGAGCCGGACTTCTTGCATATTCACGCAACAGGGACGTAAAGGCATAAACCAG
GACGCAATGATCGTGTGGGAGGATTTCATGGCGGAAGATGTGACTTTTTGCGGTGTATTT
GATGGCCATGGTCCACATGGCCATCTTGTTGCTCGCAAAGTAAGGGATGCACTGCCCCTG
AAGCTAAAAGCCCTCTTGCAGTCATTTGAATCAAATCGCAATGAGAATCCACAAGTGGAA
GCTGTGGATCCTGATAAGGATCAAGTGATGTCGGATAAAGTGGACACTCAGTGGAGAGAA
GCTTTCCTTCAATCATACAAGGCAATGGACAAAGAATTGAGGTCCCAACCTAACTTAGAT
TGCTTTTGCAGCGGCAGCACTGCTGTTACTCTAATAAAACAGGGTTCAAACCTTTATATG
GGCTATATTGGTGATTCTCGAGCAATCTTGGCGTCAAAGGATGAGAATGATTCCATGGTA
GCAGTCCAGTTGACTGTTGATCTGAAACCCGATTTACCTAAGGAAGCTGAGAGGATAAAA
CAGTGTAAAGGTCGGGTTTTTGCATTGCAAGATGAGCCCGAGGTGCACAGAGTTTGGTTG
CCATATGATAATGCCCCTGGATTAGCAATGGCTCGCGCATTTGGCGATTTTTGTGTTAAG
GAATATGGGGTAATTTCTATGCCAGAATTTTCTCACCGGGTTCTTACAGAGAGGGACCAG
TTCATTGTTCTTGCTTCTGATGGGGTTTGGGATGTATTGAGTAATGAAGAAGTTGTTGAT
ATAGTGTCATCAGCTCCTACACGGTCGTCAGCTGCCAGAATCCTAGTCGACTCTGCTGCT
CTTGAATGGAAAACCAAATATCCAACTTCAAAAATGGATGATTGTGCTGTTGTTTGCTTA
TTCTTGGACGGACATATGGACATGGAATCCGACAATGAGGAACAATGCTTCTCTTCTGCT
ACTCTTCAGCGTAACCATTCTGATAACGCAGCTGAATCAGATGATGGGCACAGCTCCGAG
CCATCTCTACAGAGAAATTTCACTGTTAGATCAGGTGAAGAGAATGATGCTTATAAACGA
GTAGTAGCCGAAGCAGAAGCAAATCAAGAAACCGTAGTAACAGAAGATCAGAAATGGTCA
GGGTTAGAAGGTGTTACTCGAGTAAACTCTCTGGTTCAGCTTCCAAGATTTTCAGAAGAA
CGTCCAGGACCTTAA

Peptide Sequence

PEP ID

XP_016478410.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 52 [Nicotiana tabacum]
Sequence

MGGCVSSSSSSTCSSRSNGEKVSHECLGISMFGRKRIRRSLSDPAAALQHLSSIPNRIFT
NGKSRTSCIFTQQGRKGINQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDALPL
KLKALLQSFESNRNENPQVEAVDPDKDQVMSDKVDTQWREAFLQSYKAMDKELRSQPNLD
CFCSGSTAVTLIKQGSNLYMGYIGDSRAILASKDENDSMVAVQLTVDLKPDLPKEAERIK
QCKGRVFALQDEPEVHRVWLPYDNAPGLAMARAFGDFCVKEYGVISMPEFSHRVLTERDQ
FIVLASDGVWDVLSNEEVVDIVSSAPTRSSAARILVDSAALEWKTKYPTSKMDDCAVVCL
FLDGHMDMESDNEEQCFSSATLQRNHSDNAAESDDGHSSEPSLQRNFTVRSGEENDAYKR
VVAEAEANQETVVTEDQKWSGLEGVTRVNSLVQLPRFSEERPGP

Transcript Sequence

Gene sequence data has not been registered.